```mermaid
flowchart TB
    subgraph " "
    subgraph params
    v0["reads"]
    end
    v2([FastQC])
    v3([MultiQC])
    v4([Fastp])
    v6([NubeamDedup])
    v8([PublishReads])
    v0 --> v2
    v2 --> v3
    v0 --> v4
    v4 --> v6
    v6 --> v8
    end
```

# próbki do CRESIL

https://www.ncbi.nlm.nih.gov/sra/?term=SRR33151019
SRX28412270: eccDNA of human dermal fibroblasts:donor2
OXFORD_NANOPORE (MinION) run: 7,194 spots, 49.9M bases, 42.3Mb downloads

SRR33151018
SRR33151019
SRR33151020

# Inne programy

1. krótkie odczyty
    1. ecc_pipe
    2. circle_finder
    3. circle_map
2. długie odczyty
    1. cresil
    2. FLED